Pseudomonas brassicacearum subsp. brassicacearum NFM421, PSEBR_a5629

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in GBrowse

Gene Feature Overview

Strain Pseudomonas brassicacearum subsp. brassicacearum NFM421
GCF_000194805.1|latest
Locus Tag
PSEBR_a5629
Name
Replicon chromosome
Genomic location 6799083 - 6800051 (+ strand)

Cross-References

RefSeq YP_004357172.1
GI 330812710
Entrez 10474943
INSDC AEA72168.1
NCBI Locus Tag PSEBR_a5629
UniParc UPI0002040EEF
UniProtKB Acc F2K791
UniProtKB ID F2K791_PSEBN
UniRef100 UniRef100_A0A0D0T8D2
UniRef50 UniRef50_Q51366
UniRef90 UniRef90_Q3K486

Product

Feature Type CDS
Coding Frame 1
Product Name
GDP-mannose 4,6-dehydratase
Synonyms
Evidence for Translation
Charge (pH 7) -2.89
Kyte-Doolittle Hydrophobicity Value -0.243
Molecular Weight (kDa) 36.3
Isoelectric Point (pI) 6.43

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 610 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG004999 (389 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSEBR_a5629

Human Homologs

Ensembl 97, assembly GRCh38.p12
GDP-mannose 4,6-dehydratase [Source:HGNC Symbol;Acc:HGNC:4369]
E-value: 3.0e-83
Percent Identity: 46.9

References

No references are associated with this feature.