Pseudomonas brassicacearum subsp. brassicacearum NFM421, PSEBR_a5631

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in GBrowse

Gene Feature Overview

Strain Pseudomonas brassicacearum subsp. brassicacearum NFM421
GCF_000194805.1|latest
Locus Tag
PSEBR_a5631
Name
Replicon chromosome
Genomic location 6802294 - 6803559 (+ strand)

Cross-References

RefSeq YP_004357175.1
GI 330812713
Entrez 10474946
INSDC AEA72171.1
NCBI Locus Tag PSEBR_a5631
UniParc UPI0002040EF2
UniProtKB Acc F2K794
UniProtKB ID F2K794_PSEBN
UniRef100 UniRef100_A0A0D0RD00
UniRef50 UniRef50_G3XD58
UniRef90 UniRef90_G8Q878

Product

Feature Type CDS
Coding Frame 1
Product Name
ABC transporter ATP-binding protein
Synonyms
Evidence for Translation
Charge (pH 7) -0.46
Kyte-Doolittle Hydrophobicity Value -0.199
Molecular Weight (kDa) 47.3
Isoelectric Point (pI) 6.91

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 669 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001312 (616 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSEBR_a5631

Human Homologs

Ensembl 97, assembly GRCh38.p12
ATP binding cassette subfamily A member 8 [Source:HGNC Symbol;Acc:HGNC:38]
E-value: 6.2e-20
Percent Identity: 27.3
Ensembl 97, assembly GRCh38.p12
ATP binding cassette subfamily A member 8 [Source:HGNC Symbol;Acc:HGNC:38]
E-value: 6.2e-20
Percent Identity: 27.3
Ensembl 97, assembly GRCh38.p12
ATP binding cassette subfamily A member 8 [Source:HGNC Symbol;Acc:HGNC:38]
E-value: 6.2e-20
Percent Identity: 27.3

References

No references are associated with this feature.