Pseudomonas sp. UW4, PputUW4_00036

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in GBrowse

Gene Feature Overview

Strain Pseudomonas sp. UW4
GCF_000316175.1|latest
Locus Tag
PputUW4_00036
Name
Replicon chromosome
Genomic location 39024 - 39827 (+ strand)

Cross-References

RefSeq YP_007027050.1
GI 426406951
Entrez 14055978
NCBI Locus Tag PputUW4_00036

Product

Feature Type CDS
Coding Frame 1
Product Name
ABC transporter family protein
Synonyms
Evidence for Translation
Charge (pH 7) -2.35
Kyte-Doolittle Hydrophobicity Value 0.155
Molecular Weight (kDa) 28613.6
Isoelectric Point (pI) 6.40

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 669 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG002403 (509 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PputUW4_00036

Human Homologs

Ensembl 97, assembly GRCh38.p12
ATP binding cassette subfamily A member 10 [Source:HGNC Symbol;Acc:HGNC:30]
E-value: 6.5e-15
Percent Identity: 27.4
Ensembl 97, assembly GRCh38.p12
ATP binding cassette subfamily A member 10 [Source:HGNC Symbol;Acc:HGNC:30]
E-value: 6.5e-15
Percent Identity: 27.4

References

No references are associated with this feature.