Pseudomonas sp. UW4, PputUW4_00094 (trpI)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas sp. UW4
GCF_000316175.1|latest |
| Locus Tag |
PputUW4_00094
|
| Name |
trpI
|
| Replicon | chromosome |
| Genomic location | 94650 - 95543 (- strand) |
Cross-References
| RefSeq | YP_007027108.1 |
| GI | 426407009 |
| Entrez | 14053774 |
| NCBI Locus Tag | PputUW4_00094 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
HTH-type transcriptional regulator
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | -2.40 |
| Kyte-Doolittle Hydrophobicity Value | -0.167 |
| Molecular Weight (kDa) | 32656.0 |
| Isoelectric Point (pI) | 6.40 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
Pathogen Association Analysis
| Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 405 genera
|
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG000037 (553 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: PputUW4_00094
Search term: trpI
Search term: HTH-type transcriptional regulator
|
Human Homologs
References
No references are associated with this feature.