Pseudomonas sp. UW4, PputUW4_01170

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas sp. UW4
GCF_000316175.1|latest
Locus Tag
PputUW4_01170
Name
Replicon chromosome
Genomic location 1377117 - 1379609 (+ strand)

Cross-References

RefSeq YP_007028182.1
GI 426408083
EC Number 3.2.1.81
Entrez 14054126
NCBI Locus Tag PputUW4_01170

Product

Feature Type CDS
Coding Frame 1
Product Name
Beta-agarase
Synonyms
Evidence for Translation
Charge (pH 7) -14.22
Kyte-Doolittle Hydrophobicity Value -0.350
Molecular Weight (kDa) 89811.1
Isoelectric Point (pI) 5.21

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 31 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001008 (463 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PputUW4_01170
Search term: Beta-agarase

Human Homologs

References

No references are associated with this feature.