Pseudomonas sp. UW4, PputUW4_01408

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas sp. UW4
GCF_000316175.1|latest
Locus Tag
PputUW4_01408
Name
Replicon chromosome
Genomic location 1646091 - 1646774 (- strand)

Cross-References

RefSeq YP_007028419.1
GI 426408320
Entrez 14055478
INSDC AFY18614.1
NCBI Locus Tag PputUW4_01408
UniParc UPI00027031B9
UniProtKB Acc K9NFP0
UniProtKB ID K9NFP0_9PSED
UniRef100 UniRef100_K9NFP0
UniRef50 UniRef50_A0A0B7DDC9
UniRef90 UniRef90_A0A0B7DDC9

Product

Feature Type CDS
Coding Frame 1
Product Name
ABC transporter family protein
Synonyms
Evidence for Translation
Charge (pH 7) -6.58
Kyte-Doolittle Hydrophobicity Value -0.098
Molecular Weight (kDa) 24.5
Isoelectric Point (pI) 5.15

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 669 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG002712 (535 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PputUW4_01408

Human Homologs

Ensembl 110, assembly GRCh38.p14
ATP binding cassette subfamily B member 1 [Source:HGNC Symbol;Acc:HGNC:40]
E-value: 1.4e-14
Percent Identity: 31.6
Ensembl 110, assembly GRCh38.p14
ATP binding cassette subfamily B member 1 [Source:HGNC Symbol;Acc:HGNC:40]
E-value: 1.4e-14
Percent Identity: 31.6
Ensembl 110, assembly GRCh38.p14
ATP binding cassette subfamily B member 1 [Source:HGNC Symbol;Acc:HGNC:40]
E-value: 1.4e-14
Percent Identity: 31.6

References

No references are associated with this feature.