Pseudomonas sp. UW4, PputUW4_01530

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas sp. UW4
GCF_000316175.1|latest
Locus Tag
PputUW4_01530
Name
Replicon chromosome
Genomic location 1784261 - 1785175 (- strand)

Cross-References

RefSeq YP_007028540.1
GI 426408441
Entrez 14051017
NCBI Locus Tag PputUW4_01530

Product

Feature Type CDS
Coding Frame 1
Product Name
NAD-dependent epimerase/dehydratase
Synonyms
Evidence for Translation
Charge (pH 7) 0.08
Kyte-Doolittle Hydrophobicity Value -0.156
Molecular Weight (kDa) 33576.0
Isoelectric Point (pI) 7.03

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 636 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG005000 (390 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PputUW4_01530

Human Homologs

Ensembl 97, assembly GRCh38.p12
TDP-glucose 4,6-dehydratase [Source:HGNC Symbol;Acc:HGNC:20324]
E-value: 2.2e-19
Percent Identity: 29.3

References

No references are associated with this feature.