Pseudomonas sp. UW4, PputUW4_02527 (kaiC)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas sp. UW4
GCF_000316175.1|latest
Locus Tag
PputUW4_02527
Name
kaiC
Replicon chromosome
Genomic location 2940251 - 2941852 (- strand)

Cross-References

RefSeq YP_007029527.1
GI 426409428
Entrez 14055718
NCBI Locus Tag PputUW4_02527

Product

Feature Type CDS
Coding Frame 1
Product Name
circadian clock protein KaiC
Synonyms
Evidence for Translation
Charge (pH 7) -8.21
Kyte-Doolittle Hydrophobicity Value -0.172
Molecular Weight (kDa) 58905.5
Isoelectric Point (pI) 6.10

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 243 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG018005 (111 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PputUW4_02527
Search term: kaiC

Human Homologs

References

No references are associated with this feature.