Pseudomonas sp. UW4, PputUW4_02633 (prtD)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas sp. UW4
GCF_000316175.1|latest
Locus Tag
PputUW4_02633
Name
prtD
Replicon chromosome
Genomic location 3082707 - 3084428 (- strand)

Cross-References

RefSeq YP_007029633.1
GI 426409534
Entrez 14055893
NCBI Locus Tag PputUW4_02633

Product

Feature Type CDS
Coding Frame 1
Product Name
type I secretion system ATPase PrtD
Synonyms
Evidence for Translation
Charge (pH 7) 5.87
Kyte-Doolittle Hydrophobicity Value 0.318
Molecular Weight (kDa) 61975.6
Isoelectric Point (pI) 9.23

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 669 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001198 (779 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PputUW4_02633
Search term: prtD

Human Homologs

Ensembl 110, assembly GRCh38.p14
ATP binding cassette subfamily C member 6 [Source:HGNC Symbol;Acc:HGNC:57]
E-value: 2.4e-21
Percent Identity: 32.7
Ensembl 110, assembly GRCh38.p14
ATP binding cassette subfamily C member 6 [Source:HGNC Symbol;Acc:HGNC:57]
E-value: 2.4e-21
Percent Identity: 32.7
Ensembl 110, assembly GRCh38.p14
ATP binding cassette subfamily C member 6 [Source:HGNC Symbol;Acc:HGNC:57]
E-value: 2.4e-21
Percent Identity: 32.7

References

No references are associated with this feature.