Pseudomonas sp. UW4, PputUW4_02930 (pyrD1)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas sp. UW4
GCF_000316175.1|latest
Locus Tag
PputUW4_02930
Name
pyrD1
Replicon chromosome
Genomic location 3447065 - 3448339 (+ strand)

Cross-References

RefSeq YP_007029930.1
GI 426409831
EC Number 1.3.1.2
Entrez 14055928
INSDC AFY20125.1
NCBI Locus Tag PputUW4_02930
UniParc UPI00027028E4
UniProtKB Acc K9NLP3
UniProtKB ID K9NLP3_9PSED
UniRef100 UniRef100_K9NLP3
UniRef50 UniRef50_G8QBC2
UniRef90 UniRef90_G8QBC2

Product

Feature Type CDS
Coding Frame 1
Product Name
dihydropyrimidine dehydrogenase
Synonyms
Evidence for Translation
Charge (pH 7) -10.80
Kyte-Doolittle Hydrophobicity Value -0.036
Molecular Weight (kDa) 45.9
Isoelectric Point (pI) 5.25

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 387 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000430 (922 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PputUW4_02930
Search term: pyrD1

Human Homologs

Ensembl 110, assembly GRCh38.p14
dihydropyrimidine dehydrogenase [Source:HGNC Symbol;Acc:HGNC:3012]
E-value: 6.1e-59
Percent Identity: 31.8

References

No references are associated with this feature.