Pseudomonas sp. UW4, PputUW4_03076

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas sp. UW4
GCF_000316175.1|latest
Locus Tag
PputUW4_03076
Name
Replicon chromosome
Genomic location 3611314 - 3612900 (- strand)

Cross-References

RefSeq YP_007030076.1
GI 426409977
Entrez 14055948
NCBI Locus Tag PputUW4_03076

Product

Feature Type CDS
Coding Frame 1
Product Name
type VI secretion-associated protein
Synonyms
Evidence for Translation
Charge (pH 7) -12.96
Kyte-Doolittle Hydrophobicity Value -0.279
Molecular Weight (kDa) 58535.9
Isoelectric Point (pI) 5.28

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 54 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG026161 (9 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PputUW4_03076

Human Homologs

References

No references are associated with this feature.