Pseudomonas sp. UW4, PputUW4_03084 (clpV)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in GBrowse

Gene Feature Overview

Strain Pseudomonas sp. UW4
GCF_000316175.1|latest
Locus Tag
PputUW4_03084
Name
clpV
Replicon chromosome
Genomic location 3624063 - 3626705 (- strand)

Cross-References

RefSeq YP_007030084.1
GI 426409985
Entrez 14055951
NCBI Locus Tag PputUW4_03084

Product

Feature Type CDS
Coding Frame 1
Product Name
ClpV1 family type VI secretion ATPase
Synonyms
Evidence for Translation
Charge (pH 7) -19.73
Kyte-Doolittle Hydrophobicity Value -0.187
Molecular Weight (kDa) 96631.9
Isoelectric Point (pI) 5.47

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 597 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000089 (1199 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PputUW4_03084
Search term: clpV

Human Homologs

Ensembl 97, assembly GRCh38.p12
ClpB homolog, mitochondrial AAA ATPase chaperonin [Source:HGNC Symbol;Acc:HGNC:30664]
E-value: 1.3e-38
Percent Identity: 33.2
Ensembl 97, assembly GRCh38.p12
ClpB homolog, mitochondrial AAA ATPase chaperonin [Source:HGNC Symbol;Acc:HGNC:30664]
E-value: 1.3e-38
Percent Identity: 33.2
Ensembl 97, assembly GRCh38.p12
ClpB homolog, mitochondrial AAA ATPase chaperonin [Source:HGNC Symbol;Acc:HGNC:30664]
E-value: 1.3e-38
Percent Identity: 33.2
Ensembl 97, assembly GRCh38.p12
ClpB homolog, mitochondrial AAA ATPase chaperonin [Source:HGNC Symbol;Acc:HGNC:30664]
E-value: 1.3e-38
Percent Identity: 33.2
Ensembl 97, assembly GRCh38.p12
ClpB homolog, mitochondrial AAA ATPase chaperonin [Source:HGNC Symbol;Acc:HGNC:30664]
E-value: 1.3e-38
Percent Identity: 33.2

References

No references are associated with this feature.