Pseudomonas sp. UW4, PputUW4_03088

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas sp. UW4
GCF_000316175.1|latest
Locus Tag
PputUW4_03088
Name
Replicon chromosome
Genomic location 3629777 - 3631132 (- strand)

Cross-References

RefSeq YP_007030088.1
GI 426409989
Entrez 14053592
NCBI Locus Tag PputUW4_03088

Product

Feature Type CDS
Coding Frame 1
Product Name
type VI secretion protein
Synonyms
Evidence for Translation
Charge (pH 7) -9.25
Kyte-Doolittle Hydrophobicity Value -0.157
Molecular Weight (kDa) 50880.6
Isoelectric Point (pI) 5.60

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 109 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG016078 (30 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PputUW4_03088

Human Homologs

References

No references are associated with this feature.