Pseudomonas sp. UW4, PputUW4_03229 (potD1)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas sp. UW4
GCF_000316175.1|latest
Locus Tag
PputUW4_03229
Name
potD1
Replicon chromosome
Genomic location 3778170 - 3779195 (+ strand)

Cross-References

RefSeq YP_007030229.1
GI 426410130
Entrez 14053696
NCBI Locus Tag PputUW4_03229

Product

Feature Type CDS
Coding Frame 1
Product Name
polyamine ABC transporter substrate-binding protein
Synonyms
Evidence for Translation
Charge (pH 7) -2.52
Kyte-Doolittle Hydrophobicity Value -0.113
Molecular Weight (kDa) 36976.7
Isoelectric Point (pI) 5.46

Subcellular localization

Individual Mappings
Localization Confidence PMID
Periplasmic Class 3
Additional evidence for subcellular localization

PDB 3D Structures

Accession Header Accession Date Compound Source Resolution Method Percent Identity
6DGV FLUORESCENT PROTEIN 05/18/18 iGABASnFR Fluorescent GABA Sensor precursor PSEUDOMONAS FLUORESCENS 2.8 X-RAY DIFFRACTION 93.1

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 153 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG016519 (133 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PputUW4_03229
Search term: potD1

Human Homologs

References

No references are associated with this feature.