Pseudomonas sp. UW4, PputUW4_03804 (sdhD)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas sp. UW4
GCF_000316175.1|latest
Locus Tag
PputUW4_03804
Name
sdhD
Replicon chromosome
Genomic location 4400330 - 4400698 (- strand)

Cross-References

RefSeq YP_007030801.1
GI 426410702
EC Number 1.3.99.1
Entrez 14054727
INSDC AFY20996.1
NCBI Locus Tag PputUW4_03804
UniParc UPI0000387EC8
UniProtKB Acc K9NLQ2
UniProtKB ID K9NLQ2_9PSED
UniRef100 UniRef100_A0A0C2A0F9
UniRef50 UniRef50_G8Q3B8
UniRef90 UniRef90_G8Q3B8

Product

Feature Type CDS
Coding Frame 1
Product Name
succinate dehydrogenase subunit D
Synonyms
Evidence for Translation
Charge (pH 7) 2.66
Kyte-Doolittle Hydrophobicity Value 0.878
Molecular Weight (kDa) 13.4
Isoelectric Point (pI) 9.04

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 108 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG003781 (539 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PputUW4_03804
Search term: sdhD

Human Homologs

References

No references are associated with this feature.