Pseudomonas sp. UW4, PputUW4_04994 (fecI5)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas sp. UW4
GCF_000316175.1|latest
Locus Tag
PputUW4_04994
Name
fecI5
Replicon chromosome
Genomic location 5703245 - 5703763 (+ strand)

Cross-References

RefSeq YP_007031989.1
GI 426411890
Entrez 14053190
INSDC AFY22184.1
NCBI Locus Tag PputUW4_04994
UniParc UPI00029CF433
UniProtKB Acc K9NR39
UniProtKB ID K9NR39_9PSED
UniRef100 UniRef100_K9NR39
UniRef50 UniRef50_Q4K4S1
UniRef90 UniRef90_K9NR39

Product

Feature Type CDS
Coding Frame 1
Product Name
RNA polymerase sigma factor
Synonyms
Evidence for Translation
Charge (pH 7) 1.41
Kyte-Doolittle Hydrophobicity Value -0.260
Molecular Weight (kDa) 19625.4
Isoelectric Point (pI) 8.19

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 175 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000463 (1798 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PputUW4_04994
Search term: fecI5

Human Homologs

References

No references are associated with this feature.