Pseudomonas sp. UW4, PputUW4_05387

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas sp. UW4
GCF_000316175.1|latest
Locus Tag
PputUW4_05387
Name
Replicon chromosome
Genomic location 6119198 - 6120064 (- strand)

Cross-References

RefSeq YP_007032381.1
GI 426412282
Entrez 14050864
INSDC AFY22576.1
NCBI Locus Tag PputUW4_05387
UniParc UPI00003C7591
UniProtKB Acc K9NR93
UniProtKB ID K9NR93_9PSED
UniRef100 UniRef100_A0A0C2AF74
UniRef50 UniRef50_C1DH57
UniRef90 UniRef90_Q4K3G5

Product

Feature Type CDS
Coding Frame 1
Product Name
RpiR family transcriptional regulator
Synonyms
Evidence for Translation
Charge (pH 7) 1.76
Kyte-Doolittle Hydrophobicity Value 0.170
Molecular Weight (kDa) 31.2
Isoelectric Point (pI) 7.40

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 224 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG004989 (552 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PputUW4_05387

Human Homologs

References

No references are associated with this feature.