Pseudomonas sp. UW4, PputUW4_05400

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas sp. UW4
GCF_000316175.1|latest
Locus Tag
PputUW4_05400
Name
Replicon chromosome
Genomic location 6133676 - 6134881 (- strand)

Cross-References

RefSeq YP_007032394.1
GI 426412295
Entrez 14050873
NCBI Locus Tag PputUW4_05400

Product

Feature Type CDS
Coding Frame 1
Product Name
cobalamin synthesis protein/P47K
Synonyms
Evidence for Translation
Charge (pH 7) -29.15
Kyte-Doolittle Hydrophobicity Value -0.257
Molecular Weight (kDa) 45373.7
Isoelectric Point (pI) 4.23

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 366 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG005068 (548 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PputUW4_05400

Human Homologs

Ensembl 97, assembly GRCh38.p12
COBW domain containing 2 [Source:HGNC Symbol;Acc:HGNC:17907]
E-value: 2.7e-28
Percent Identity: 30.6

References

No references are associated with this feature.