Pseudomonas protegens Pf-5, PFL_0013 (glyS)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_0013
Name
glyS
Replicon chromosome
Genomic location 14740 - 16794 (- strand)

Cross-References

RefSeq YP_257165.1
GI 70733526
EC Number 6.1.1.14
Entrez 3480613
INSDC AAY95431.1
NCBI Locus Tag PFL_0013
UniParc UPI000054CB6B
UniProtKB Acc Q4KKR8
UniProtKB ID SYGB_PSEF5
UniRef100 UniRef100_Q4KKR8
UniRef50 UniRef50_Q4KKR8
UniRef90 UniRef90_Q4KKR8

Product

Feature Type CDS
Coding Frame 1
Product Name
glycyl-tRNA synthetase subunit beta
Synonyms
Evidence for Translation
Charge (pH 7) -9.14
Kyte-Doolittle Hydrophobicity Value -0.095
Molecular Weight (kDa) 75042.1
Isoelectric Point (pI) 5.16

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 403 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000008 (538 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_0013
Search term: glyS

Human Homologs

References

No references are associated with this feature.