Pseudomonas protegens Pf-5, PFL_0035

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_0035
Name
Replicon chromosome
Genomic location 36936 - 37379 (- strand)

Cross-References

RefSeq YP_257187.1
GI 70733548
Entrez 3480635
INSDC AAY95453.1
NCBI Locus Tag PFL_0035
UniParc UPI000054CB81
UniProtKB Acc Q4KKP6
UniProtKB ID Q4KKP6_PSEF5
UniRef100 UniRef100_Q4KKP6
UniRef50 UniRef50_Q4KKP6
UniRef90 UniRef90_Q4KKP6

Product

Feature Type CDS
Coding Frame 1
Product Name
hypothetical protein
Synonyms
Evidence for Translation
Charge (pH 7) 5.19
Kyte-Doolittle Hydrophobicity Value -0.541
Molecular Weight (kDa) 16246.5
Isoelectric Point (pI) 9.84

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 26 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG019691 (39 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_0035

Human Homologs

References

No references are associated with this feature.