Pseudomonas protegens Pf-5, PFL_0041

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_0041
Name
Replicon chromosome
Genomic location 41406 - 41630 (+ strand)

Cross-References

RefSeq YP_257193.1
GI 70733554
Entrez 3480641
INSDC AAY95459.1
NCBI Locus Tag PFL_0041
UniParc UPI000054CB87
UniProtKB Acc Q4KKP0
UniProtKB ID Q4KKP0_PSEF5
UniRef100 UniRef100_Q4KKP0
UniRef50 UniRef50_Q4KKP0
UniRef90 UniRef90_Q4KKP0

Product

Feature Type CDS
Coding Frame 1
Product Name
hypothetical protein
Synonyms
Evidence for Translation
Charge (pH 7) 1.16
Kyte-Doolittle Hydrophobicity Value 0.169
Molecular Weight (kDa) 7.5
Isoelectric Point (pI) 8.21

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 23 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000039 (499 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_0041

Human Homologs

References

No references are associated with this feature.