Pseudomonas protegens Pf-5, PFL_0042

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_0042
Name
Replicon chromosome
Genomic location 41691 - 42692 (- strand)

Cross-References

RefSeq YP_257194.1
GI 70733555
EC Number 1.-.-.-
Entrez 3480642
INSDC AAY95460.1
NCBI Locus Tag PFL_0042
UniParc UPI000054CB88
UniProtKB Acc Q4KKN9
UniProtKB ID Q4KKN9_PSEF5
UniRef100 UniRef100_Q4KKN9
UniRef50 UniRef50_Q4KKN9
UniRef90 UniRef90_Q4KKN9

Product

Feature Type CDS
Coding Frame 1
Product Name
luciferase family oxidoreductase
Synonyms
Evidence for Translation
Charge (pH 7) -0.63
Kyte-Doolittle Hydrophobicity Value -0.079
Molecular Weight (kDa) 36.3
Isoelectric Point (pI) 6.87

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 295 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG003070 (532 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_0042

Human Homologs

References

No references are associated with this feature.