Pseudomonas protegens Pf-5, PFL_0046

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_0046
Name
Replicon chromosome
Genomic location 44223 - 44636 (- strand)

Cross-References

RefSeq YP_257198.1
GI 70733559
Entrez 3480646
INSDC AAY95464.1
NCBI Locus Tag PFL_0046
UniParc UPI000054CB8C
UniProtKB Acc Q4KKN5
UniProtKB ID Q4KKN5_PSEF5
UniRef100 UniRef100_Q4KKN5
UniRef50 UniRef50_Q4KKN5
UniRef90 UniRef90_Q4KKN5

Product

Feature Type CDS
Coding Frame 1
Product Name
lipoprotein
Synonyms
Evidence for Translation
Charge (pH 7) -2.14
Kyte-Doolittle Hydrophobicity Value -0.472
Molecular Weight (kDa) 15.3
Isoelectric Point (pI) 6.08

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 2 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000061 (460 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_0046
Search term: lipoprotein

Human Homologs

References

No references are associated with this feature.