Pseudomonas protegens Pf-5, PFL_0061 (ctaC)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_0061
Name
ctaC
Replicon chromosome
Genomic location 59792 - 60919 (+ strand)

Cross-References

RefSeq YP_257213.1
GI 70733573
EC Number 1.9.3.1
Entrez 3480660
INSDC AAY95478.1
NCBI Locus Tag PFL_0061
UniParc UPI000054CB9B
UniProtKB Acc Q4KKM0
UniProtKB ID Q4KKM0_PSEF5
UniRef100 UniRef100_Q4KKM0
UniRef50 UniRef50_Q4KKM0
UniRef90 UniRef90_Q4KKM0

Product

Feature Type CDS
Coding Frame 1
Product Name
cytochrome c oxidase subunit II
Synonyms
Evidence for Translation
Charge (pH 7) -0.54
Kyte-Doolittle Hydrophobicity Value 0.042
Molecular Weight (kDa) 41.8
Isoelectric Point (pI) 6.92

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 397 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000103 (511 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_0061
Search term: ctaC

Human Homologs

Ensembl 97, assembly GRCh38.p12
mitochondrially encoded cytochrome c oxidase II [Source:HGNC Symbol;Acc:HGNC:7421]
E-value: 1.4e-31
Percent Identity: 32.4

References

No references are associated with this feature.