Pseudomonas protegens Pf-5, PFL_0081

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_0081
Name
Replicon chromosome
Genomic location 78418 - 78705 (- strand)

Cross-References

RefSeq YP_257233.1
GI 70733593
Entrez 3480680
INSDC AAY95498.1
NCBI Locus Tag PFL_0081
UniParc UPI000054CBAF
UniProtKB Acc Q4KKK0
UniProtKB ID Q4KKK0_PSEF5
UniRef100 UniRef100_Q4KKK0
UniRef50 UniRef50_A4XNL1
UniRef90 UniRef90_Q4KKK0

Product

Feature Type CDS
Coding Frame 1
Product Name
hypothetical protein
Synonyms
Evidence for Translation
Charge (pH 7) -1.02
Kyte-Doolittle Hydrophobicity Value -0.168
Molecular Weight (kDa) 10.6
Isoelectric Point (pI) 5.05

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 41 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG005033 (538 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_0081

Human Homologs

References

No references are associated with this feature.