Pseudomonas protegens Pf-5, PFL_0099

Gene Feature Overview

Strain	Pseudomonas protegens Pf-5 GCF_000012265.1|latest
Locus Tag	PFL_0099
Name
Replicon	chromosome
Genomic location	99944 - 100747 (- strand)

Cross-References

RefSeq	YP_257251.1
GI	70733611
Entrez	3480698
INSDC	AAY95516.1
NCBI Locus Tag	PFL_0099
UniParc	UPI000054CBC1
UniProtKB Acc	Q4KKI2
UniProtKB ID	Q4KKI2_PSEF5
UniRef100	UniRef100_Q4KKI2
UniRef50	UniRef50_Q0BY45
UniRef90	UniRef90_G8PX70

Product

Feature Type	CDS
Coding Frame	1
Product Name	ABC transporter ATP-binding protein
Synonyms
Evidence for Translation
Charge (pH 7)	-3.59
Kyte-Doolittle Hydrophobicity Value	0.111
Molecular Weight (kDa)	28.5
Isoelectric Point (pI)	5.96

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Membrane Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 669 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG002403 (492 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PFL_0099 Search term: ABC transporter ATP-binding protein

Human Homologs

Ensembl 110, assembly GRCh38.p14	ENSP00000428032 ATP binding cassette subfamily A member 10 [Source:HGNC Symbol;Acc:HGNC:30] E-value: 1.5e-15 Percent Identity: 28.7
Ensembl 110, assembly GRCh38.p14	ENSP00000509702 ATP binding cassette subfamily A member 10 [Source:HGNC Symbol;Acc:HGNC:30] E-value: 1.5e-15 Percent Identity: 28.7
Ensembl 110, assembly GRCh38.p14	ENSP00000269081 ATP binding cassette subfamily A member 10 [Source:HGNC Symbol;Acc:HGNC:30] E-value: 1.5e-15 Percent Identity: 28.7

References