Pseudomonas protegens Pf-5, PFL_0109

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse View in GBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_0109
Name
Replicon chromosome
Genomic location 111765 - 112073 (- strand)

Cross-References

RefSeq YP_257261.1
GI 70733621
Entrez 3480708
INSDC AAY95526.1
NCBI Locus Tag PFL_0109
UniParc UPI000054CBCB
UniProtKB Acc Q4KKH2
UniProtKB ID Q4KKH2_PSEF5
UniRef100 UniRef100_Q4KKH2
UniRef50 UniRef50_G8PY86
UniRef90 UniRef90_Q4KKH2

Product

Feature Type CDS
Coding Frame 1
Product Name
hypothetical protein
Synonyms
Evidence for Translation
Charge (pH 7) -3.57
Kyte-Doolittle Hydrophobicity Value 0.416
Molecular Weight (kDa) 10.8
Isoelectric Point (pI) 4.59

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 6 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG005007 (526 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_0109

Human Homologs

References

No references are associated with this feature.