Pseudomonas protegens Pf-5, PFL_0166

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_0166
Name
Replicon chromosome
Genomic location 195347 - 204481 (+ strand)

Cross-References

RefSeq YP_257313.1
GI 70733673
Entrez 3480760
INSDC AAY95578.1
NCBI Locus Tag PFL_0166
UniParc UPI000054CBFE
UniProtKB Acc Q4KKC0
UniProtKB ID Q4KKC0_PSEF5
UniRef100 UniRef100_Q4KKC0
UniRef50 UniRef50_Q4KKC0
UniRef90 UniRef90_Q4KKC0

Product

Feature Type CDS
Coding Frame 1
Product Name
HecA family adhesin/hemagglutinin
Synonyms
Evidence for Translation
Charge (pH 7) -36.65
Kyte-Doolittle Hydrophobicity Value -0.253
Molecular Weight (kDa) 313185.4
Isoelectric Point (pI) 5.33

Subcellular localization

Individual Mappings
Localization Confidence PMID
Outer Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 74 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG019705 (51 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_0166

Human Homologs

References

No references are associated with this feature.