Pseudomonas protegens Pf-5, PFL_0228

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_0228
Name
Replicon chromosome
Genomic location 264881 - 265462 (+ strand)

Cross-References

RefSeq YP_257374.1
GI 70733734
Entrez 3480821
INSDC AAY95639.1
NCBI Locus Tag PFL_0228
UniParc UPI000054CC3B
UniProtKB Acc Q4KK59
UniProtKB ID Q4KK59_PSEF5
UniRef100 UniRef100_Q4KK59
UniRef50 UniRef50_D7HUR0
UniRef90 UniRef90_Q4KK59

Product

Feature Type CDS
Coding Frame 1
Product Name
hypothetical protein
Synonyms
Evidence for Translation
Charge (pH 7) 2.09
Kyte-Doolittle Hydrophobicity Value -0.234
Molecular Weight (kDa) 21.3
Isoelectric Point (pI) 7.77

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 122 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000200 (528 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_0228

Human Homologs

References

No references are associated with this feature.