Pseudomonas protegens Pf-5, PFL_0313 (oprQ)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_0313
Name
oprQ
Replicon chromosome
Genomic location 363840 - 365123 (+ strand)

Cross-References

RefSeq YP_257459.1
GI 70733819
Entrez 3480906
INSDC AAY95724.1
NCBI Locus Tag PFL_0313
UniParc UPI000054CC90
UniProtKB Acc Q4KJX4
UniProtKB ID Q4KJX4_PSEF5
UniRef100 UniRef100_Q4KJX4
UniRef50 UniRef50_A0A024HH67
UniRef90 UniRef90_Q4KJX4

Product

Feature Type CDS
Coding Frame 1
Product Name
porin
Synonyms
Evidence for Translation
Charge (pH 7) -1.07
Kyte-Doolittle Hydrophobicity Value -0.334
Molecular Weight (kDa) 46184.0
Isoelectric Point (pI) 6.54

Subcellular localization

Individual Mappings
Localization Confidence PMID
Outer Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 17 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG002810 (518 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_0313
Search term: oprQ
Search term: porin

Human Homologs

References

No references are associated with this feature.