Pseudomonas protegens Pf-5, PFL_0708

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_0708
Name
Replicon chromosome
Genomic location 823324 - 824220 (+ strand)

Cross-References

RefSeq YP_257850.1
GI 70734210
Entrez 3481297
INSDC AAY96115.1
NCBI Locus Tag PFL_0708
UniParc UPI000054CE16
UniProtKB Acc Q4KIT3
UniProtKB ID Q4KIT3_PSEF5
UniRef100 UniRef100_Q4KIT3
UniRef50 UniRef50_E1SBB7
UniRef90 UniRef90_K9NF03

Product

Feature Type CDS
Coding Frame 1
Product Name
RIO1 family serine kinase
Synonyms
Evidence for Translation
Charge (pH 7) -11.11
Kyte-Doolittle Hydrophobicity Value -0.378
Molecular Weight (kDa) 33.1
Isoelectric Point (pI) 4.74

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 156 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG004421 (529 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_0708

Human Homologs

References

No references are associated with this feature.