Pseudomonas protegens Pf-5, PFL_0744

Gene Feature Overview

Strain	Pseudomonas protegens Pf-5 GCF_000012265.1|latest
Locus Tag	PFL_0744
Name
Replicon	chromosome
Genomic location	869333 - 870601 (+ strand)

Cross-References

RefSeq	YP_257881.1
GI	70734241
Entrez	3481328
INSDC	AAY96146.1
NCBI Locus Tag	PFL_0744
UniParc	UPI000054CE35
UniProtKB Acc	Q4KIQ2
UniProtKB ID	Q4KIQ2_PSEF5
UniRef100	UniRef100_Q4KIQ2
UniRef50	UniRef50_G8Q662
UniRef90	UniRef90_Q4KIQ2

Product

Feature Type	CDS
Coding Frame	1
Product Name	diguanylate cyclase (GGDEF) domain-containing protein, YfiN family
Synonyms
Evidence for Translation
Charge (pH 7)	-1.65
Kyte-Doolittle Hydrophobicity Value	0.124
Molecular Weight (kDa)	45.7
Isoelectric Point (pI)	6.76

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Membrane Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 456 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG001080 (443 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PFL_0744 Search term: diguanylate cyclase (GGDEF) domain-containing protein, YfiN family

Human Homologs

References