Pseudomonas protegens Pf-5, PFL_1275

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_1275
Name
Replicon chromosome
Genomic location 1444328 - 1445017 (+ strand)

Cross-References

RefSeq YP_258404.1
GI 70728655
Entrez 3478153
INSDC AAY90560.1
NCBI Locus Tag PFL_1275
UniParc UPI000054D03E
UniProtKB Acc Q4KH79
UniProtKB ID Q4KH79_PSEF5
UniRef100 UniRef100_Q4KH79
UniRef50 UniRef50_I7C3M5
UniRef90 UniRef90_Q4KH79

Product

Feature Type CDS
Coding Frame 1
Product Name
OmpA family lipoprotein
Synonyms
Evidence for Translation
Charge (pH 7) -1.95
Kyte-Doolittle Hydrophobicity Value -0.186
Molecular Weight (kDa) 23989.8
Isoelectric Point (pI) 6.35

Subcellular localization

Individual Mappings
Localization Confidence PMID
Outer Membrane Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 416 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001003 (491 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_1275

Human Homologs

References

No references are associated with this feature.