Pseudomonas protegens Pf-5, PFL_1282

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_1282
Name
Replicon chromosome
Genomic location 1452991 - 1454247 (+ strand)

Cross-References

RefSeq YP_258411.1
GI 70728662
Entrez 3478160
INSDC AAY90567.1
NCBI Locus Tag PFL_1282
UniParc UPI000054D045
UniProtKB Acc Q4KH72
UniProtKB ID Q4KH72_PSEF5
UniRef100 UniRef100_Q4KH72
UniRef50 UniRef50_Q4ZPN8
UniRef90 UniRef90_Q4KH72

Product

Feature Type CDS
Coding Frame 1
Product Name
OmpA family protein
Synonyms
Evidence for Translation
Charge (pH 7) 19.90
Kyte-Doolittle Hydrophobicity Value -0.294
Molecular Weight (kDa) 43220.1
Isoelectric Point (pI) 10.57

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 294 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001010 (531 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_1282

Human Homologs

References

No references are associated with this feature.