Pseudomonas protegens Pf-5, PFL_1291

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_1291
Name
Replicon chromosome
Genomic location 1461924 - 1462832 (+ strand)

Cross-References

RefSeq YP_258420.2
GI 346642781
Entrez 3478169
INSDC AAY90576.2
NCBI Locus Tag PFL_1291
UniParc UPI000219FED1
UniProtKB Acc Q4KH63
UniProtKB ID Q4KH63_PSEF5
UniRef100 UniRef100_Q4KH63
UniRef50 UniRef50_Q4KH63
UniRef90 UniRef90_Q4KH63

Product

Feature Type CDS
Coding Frame 1
Product Name
LysR family transcriptional regulator
Synonyms
Evidence for Translation
Charge (pH 7) 4.31
Kyte-Doolittle Hydrophobicity Value -0.211
Molecular Weight (kDa) 34114.7
Isoelectric Point (pI) 8.44

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown (This protein may have multiple localization sites) Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 455 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001029 (421 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_1291

Human Homologs

References

No references are associated with this feature.