Pseudomonas protegens Pf-5, PFL_1301

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_1301
Name
Replicon chromosome
Genomic location 1470756 - 1471199 (+ strand)

Cross-References

RefSeq YP_258430.1
GI 70728681
Entrez 3475767
INSDC AAY90586.1
NCBI Locus Tag PFL_1301
UniParc UPI000054D058
UniProtKB Acc Q4KH53
UniProtKB ID Q4KH53_PSEF5
UniRef100 UniRef100_Q4KH53
UniRef50 UniRef50_Q88NR3
UniRef90 UniRef90_Q4KH53

Product

Feature Type CDS
Coding Frame 1
Product Name
hypothetical protein
Synonyms
Evidence for Translation
Charge (pH 7) -3.04
Kyte-Doolittle Hydrophobicity Value 0.154
Molecular Weight (kDa) 16202.5
Isoelectric Point (pI) 4.75

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 38 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001037 (528 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_1301

Human Homologs

References

No references are associated with this feature.