Pseudomonas protegens Pf-5, PFL_1331 (emhB)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_1331
Name
emhB
Replicon chromosome
Genomic location 1505607 - 1508753 (- strand)

Cross-References

RefSeq YP_258460.1
GI 70728711
Entrez 3478150
INSDC AAY90616.1
NCBI Locus Tag PFL_1331
UniParc UPI000054D076
UniProtKB Acc Q4KH23
UniProtKB ID Q4KH23_PSEF5
UniRef100 UniRef100_Q4KH23
UniRef50 UniRef50_P24177
UniRef90 UniRef90_Q4KH23

Product

Feature Type CDS
Coding Frame 1
Product Name
efflux transporter permease EmhB
Synonyms
Evidence for Translation
Charge (pH 7) -2.37
Kyte-Doolittle Hydrophobicity Value 0.319
Molecular Weight (kDa) 112490.6
Isoelectric Point (pI) 6.44

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AMR gene predictions from CARD database

Identified using the Resistance Gene Identifier (RGI)

Model Name Definition Accession Model Type (?) SNP Cutoff Bit Score Percent Identity CARD Version
adeF AdeF is the membrane fusion protein of the multidrug efflux complex AdeFGH. ARO:3000777 protein homolog model Strict 753.4 41.67 3.0.2

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 487 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000417 (2150 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_1331
Search term: emhB

Human Homologs

References

No references are associated with this feature.