Pseudomonas protegens Pf-5, PFL_1346

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_1346
Name
Replicon chromosome
Genomic location 1522407 - 1523870 (+ strand)

Cross-References

RefSeq YP_258475.1
GI 70728726
Entrez 3475443
INSDC AAY90631.1
NCBI Locus Tag PFL_1346
UniParc UPI000054D085
UniProtKB Acc Q4KH08
UniProtKB ID Q4KH08_PSEF5
UniRef100 UniRef100_Q4KH08
UniRef50 UniRef50_D8ITQ1
UniRef90 UniRef90_S6KAR8

Product

Feature Type CDS
Coding Frame 1
Product Name
amidase
Synonyms
Evidence for Translation
Charge (pH 7) -9.07
Kyte-Doolittle Hydrophobicity Value -0.093
Molecular Weight (kDa) 52807.7
Isoelectric Point (pI) 5.28

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 597 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000201 (929 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_1346
Search term: amidase

Human Homologs

Ensembl 97, assembly GRCh38.p12
glutaminyl-tRNA amidotransferase subunit QRSL1 [Source:HGNC Symbol;Acc:HGNC:21020]
E-value: 6.5e-29
Percent Identity: 26.8

References

No references are associated with this feature.