Pseudomonas protegens Pf-5, PFL_1347

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_1347
Name
Replicon chromosome
Genomic location 1523951 - 1524718 (+ strand)

Cross-References

RefSeq YP_258476.1
GI 70728727
Entrez 3475444
INSDC AAY90632.1
NCBI Locus Tag PFL_1347
UniParc UPI000054D086
UniProtKB Acc Q4KH07
UniProtKB ID Q4KH07_PSEF5
UniRef100 UniRef100_Q4KH07
UniRef50 UniRef50_Q4KH07
UniRef90 UniRef90_Q4KH07

Product

Feature Type CDS
Coding Frame 1
Product Name
IclR family transcriptional regulator
Synonyms
Evidence for Translation
Charge (pH 7) 2.84
Kyte-Doolittle Hydrophobicity Value -0.188
Molecular Weight (kDa) 28626.5
Isoelectric Point (pI) 8.12

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 150 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG003936 (371 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_1347

Human Homologs

References

No references are associated with this feature.