Pseudomonas protegens Pf-5, PFL_1395

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_1395
Name
Replicon chromosome
Genomic location 1575478 - 1576365 (- strand)

Cross-References

RefSeq YP_258524.1
GI 70728775
Entrez 3475725
INSDC AAY90680.1
NCBI Locus Tag PFL_1395
UniParc UPI000054D0B6
UniProtKB Acc Q4KGV9
UniProtKB ID Q4KGV9_PSEF5
UniRef100 UniRef100_Q4KGV9
UniRef50 UniRef50_Q3SU94
UniRef90 UniRef90_Q4KGV9

Product

Feature Type CDS
Coding Frame 1
Product Name
dihydrodipicolinate synthetase
Synonyms
Evidence for Translation
Charge (pH 7) -3.62
Kyte-Doolittle Hydrophobicity Value 0.143
Molecular Weight (kDa) 31.5
Isoelectric Point (pI) 5.95

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 631 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000222 (1144 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_1395

Human Homologs

References

No references are associated with this feature.