Pseudomonas protegens Pf-5, PFL_1396

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_1396
Name
Replicon chromosome
Genomic location 1576397 - 1577179 (- strand)

Cross-References

RefSeq YP_258525.1
GI 70728776
Entrez 3475726
INSDC AAY90681.1
NCBI Locus Tag PFL_1396
UniParc UPI000054D0B7
UniProtKB Acc Q4KGV8
UniProtKB ID Q4KGV8_PSEF5
UniRef100 UniRef100_Q4KGV8
UniRef50 UniRef50_L7V4C9
UniRef90 UniRef90_K9NF56

Product

Feature Type CDS
Coding Frame 1
Product Name
class II aldolase/adducin domain-containing protein
Synonyms
Evidence for Translation
Charge (pH 7) -3.30
Kyte-Doolittle Hydrophobicity Value -0.155
Molecular Weight (kDa) 28.6
Isoelectric Point (pI) 6.50

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 353 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000223 (926 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_1396

Human Homologs

References

No references are associated with this feature.