Pseudomonas protegens Pf-5, PFL_1458

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_1458
Name
Replicon chromosome
Genomic location 1637358 - 1638473 (+ strand)

Cross-References

RefSeq YP_258586.1
GI 70728837
Entrez 3475748
INSDC AAY90742.1
NCBI Locus Tag PFL_1458
UniParc UPI000054D0F2
UniProtKB Acc Q4KGP7
UniProtKB ID Q4KGP7_PSEF5
UniRef100 UniRef100_Q4KGP7
UniRef50 UniRef50_W6QWQ4
UniRef90 UniRef90_A0A0B7D688

Product

Feature Type CDS
Coding Frame 1
Product Name
lipoprotein
Synonyms
Evidence for Translation
Charge (pH 7) -8.77
Kyte-Doolittle Hydrophobicity Value -0.462
Molecular Weight (kDa) 40.5
Isoelectric Point (pI) 4.75

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 67 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000974 (536 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_1458
Search term: lipoprotein

Human Homologs

References

No references are associated with this feature.