Pseudomonas protegens Pf-5, PFL_1715 (sdhD)

Gene Feature Overview

Strain	Pseudomonas protegens Pf-5 GCF_000012265.1|latest
Locus Tag	PFL_1715
Name	sdhD
Replicon	chromosome
Genomic location	1918727 - 1919095 (+ strand)

Cross-References

RefSeq	YP_258841.1
GI	70729105
Entrez	3478175
INSDC	AAY91010.1
NCBI Locus Tag	PFL_1715
UniParc	UPI000054D1F0
UniProtKB Acc	Q4KFZ2
UniProtKB ID	Q4KFZ2_PSEF5
UniRef100	UniRef100_Q4KFZ2
UniRef50	UniRef50_W6R327
UniRef90	UniRef90_Q4KFZ2

Product

Feature Type	CDS
Coding Frame	1
Product Name	succinate dehydrogenase, hydrophobic membrane anchor protein
Synonyms
Evidence for Translation
Charge (pH 7)	2.42
Kyte-Doolittle Hydrophobicity Value	0.852
Molecular Weight (kDa)	13.6
Isoelectric Point (pI)	9.04

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Membrane Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 108 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG003781 (539 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PFL_1715 Search term: sdhD Search term: succinate dehydrogenase, hydrophobic membrane anchor protein

Human Homologs

References