Pseudomonas protegens Pf-5, PFL_1810

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_1810
Name
Replicon chromosome
Genomic location 2011562 - 2013028 (+ strand)

Cross-References

RefSeq YP_258930.1
GI 70729194
Entrez 3478363
INSDC AAY91099.1
NCBI Locus Tag PFL_1810
UniParc UPI000054D248
UniProtKB Acc Q4KFQ3
UniProtKB ID Q4KFQ3_PSEF5
UniRef100 UniRef100_Q4KFQ3
UniRef50 UniRef50_D7GI79
UniRef90 UniRef90_Q4KFQ3

Product

Feature Type CDS
Coding Frame 1
Product Name
cytosine/purines uracil thiamine allantoin permease
Synonyms
Evidence for Translation
Charge (pH 7) 1.85
Kyte-Doolittle Hydrophobicity Value 0.818
Molecular Weight (kDa) 51065.1
Isoelectric Point (pI) 7.72

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 88 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG019943 (61 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_1810

Human Homologs

References

No references are associated with this feature.