Pseudomonas protegens Pf-5, PFL_1949 (lexA)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_1949
Name
lexA
Replicon chromosome
Genomic location 2176375 - 2176980 (- strand)

Cross-References

RefSeq YP_259068.1
GI 70729331
EC Number 3.4.21.88
Entrez 3477581
INSDC AAY91236.1
NCBI Locus Tag PFL_1949
UniParc UPI000054D2D1
UniProtKB Acc Q4KFB5
UniProtKB ID Q4KFB5_PSEF5
UniRef100 UniRef100_Q4KFB5
UniRef50 UniRef50_P44858
UniRef90 UniRef90_Q8KT78

Product

Feature Type CDS
Coding Frame 1
Product Name
LexA repressor
Synonyms
Evidence for Translation
Charge (pH 7) 1.14
Kyte-Doolittle Hydrophobicity Value -0.177
Molecular Weight (kDa) 22.2
Isoelectric Point (pI) 7.63

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 472 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG002575 (536 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_1949
Search term: lexA
Search term: LexA repressor

Human Homologs

References

No references are associated with this feature.