Pseudomonas protegens Pf-5, PFL_1950 (psrA)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_1950
Name
psrA
Replicon chromosome
Genomic location 2177232 - 2177939 (+ strand)

Cross-References

RefSeq YP_259069.1
GI 70729332
Entrez 3477582
INSDC AAY91237.1
NCBI Locus Tag PFL_1950
UniParc UPI000054D2D2
UniProtKB Acc Q4KFB4
UniProtKB ID Q4KFB4_PSEF5
UniRef100 UniRef100_Q4KFB4
UniRef50 UniRef50_Q9HZJ9
UniRef90 UniRef90_G8PYY0

Product

Feature Type CDS
Coding Frame 1
Product Name
transcriptional regulator PsrA
Synonyms
Evidence for Translation
Charge (pH 7) 4.69
Kyte-Doolittle Hydrophobicity Value 0.030
Molecular Weight (kDa) 26.1
Isoelectric Point (pI) 9.76

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 277 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG002576 (535 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_1950
Search term: psrA

Human Homologs

References

No references are associated with this feature.