Pseudomonas protegens Pf-5, PFL_2681

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_2681
Name
Replicon chromosome
Genomic location 2959178 - 2959408 (+ strand)

Cross-References

RefSeq YP_259788.1
GI 70730049
Entrez 3477110
INSDC AAY91954.1
NCBI Locus Tag PFL_2681
UniParc UPI000054D598
UniProtKB Acc Q4KD95
UniProtKB ID Q4KD95_PSEF5
UniRef100 UniRef100_Q4KD95
UniRef50 UniRef50_Q2T6B3
UniRef90 UniRef90_Q4KD95

Product

Feature Type CDS
Coding Frame 1
Product Name
hypothetical protein
Synonyms
Evidence for Translation
Charge (pH 7) -2.66
Kyte-Doolittle Hydrophobicity Value -0.691
Molecular Weight (kDa) 8.4
Isoelectric Point (pI) 4.99

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 22 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000199 (402 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_2681

Human Homologs

References

No references are associated with this feature.