Pseudomonas protegens Pf-5, PFL_2758 (gspF)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_2758
Name
gspF
Replicon chromosome
Genomic location 3050202 - 3051413 (+ strand)

Cross-References

RefSeq YP_259865.1
GI 70730126
Entrez 3477031
INSDC AAY92031.1
NCBI Locus Tag PFL_2758
UniParc UPI000054D5E4
UniProtKB Acc Q4KD18
UniProtKB ID Q4KD18_PSEF5
UniRef100 UniRef100_Q4KD18
UniRef50 UniRef50_D5CMQ1
UniRef90 UniRef90_Q4KD18

Product

Feature Type CDS
Coding Frame 1
Product Name
general secretion protein F
Synonyms
Evidence for Translation
Charge (pH 7) 6.94
Kyte-Doolittle Hydrophobicity Value 0.313
Molecular Weight (kDa) 43271.9
Isoelectric Point (pI) 10.01

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 399 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000666 (814 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_2758
Search term: gspF

Human Homologs

References

No references are associated with this feature.