Pseudomonas protegens Pf-5, PFL_3230

Gene Feature Overview

Strain	Pseudomonas protegens Pf-5 GCF_000012265.1|latest
Locus Tag	PFL_3230
Name
Replicon	chromosome
Genomic location	3724991 - 3725686 (+ strand)

Cross-References

RefSeq	YP_260335.1
GI	70730594
EC Number	1.13.11.24
Entrez	3477850
INSDC	AAY92499.1
NCBI Locus Tag	PFL_3230
UniParc	UPI000054D7A4
UniProtKB Acc	Q4KBP8
UniProtKB ID	Q4KBP8_PSEF5
UniRef100	UniRef100_Q4KBP8
UniRef50	UniRef50_Q9I4C8
UniRef90	UniRef90_Q4KBP8

Product

Feature Type	CDS
Coding Frame	1
Product Name	pirin
Synonyms
Evidence for Translation
Charge (pH 7)	-6.11
Kyte-Doolittle Hydrophobicity Value	-0.389
Molecular Weight (kDa)	25254.0
Isoelectric Point (pI)	6.07

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 392 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG001167 (530 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PFL_3230 Search term: pirin

Human Homologs

Ensembl 110, assembly GRCh38.p14	ENSP00000369786 pirin [Source:HGNC Symbol;Acc:HGNC:30048] E-value: 9.8e-11 Percent Identity: 27.3
Ensembl 110, assembly GRCh38.p14	ENSP00000369785 pirin [Source:HGNC Symbol;Acc:HGNC:30048] E-value: 9.8e-11 Percent Identity: 27.3

References