Strain |
Pseudomonas protegens Pf-5
GCF_000012265.1|latest |
Locus Tag |
PFL_3241
|
Name |
mexF
|
Replicon | chromosome |
Genomic location | 3738424 - 3741603 (+ strand) |
RefSeq | YP_260346.1 |
GI | 70730605 |
Entrez | 3477861 |
INSDC | AAY92510.1 |
NCBI Locus Tag | PFL_3241 |
UniParc | UPI000054D7AF |
UniProtKB Acc | Q4KBN7 |
UniProtKB ID | Q4KBN7_PSEF5 |
UniRef100 | UniRef100_Q4KBN7 |
UniRef50 | UniRef50_Q880Q4 |
UniRef90 | UniRef90_Q4KBN7 |
Feature Type | CDS |
Coding Frame | 1 |
Product Name |
multidrug efflux RND transporter permease MexF
|
Synonyms | |
Evidence for Translation | |
Charge (pH 7) | -8.67 |
Kyte-Doolittle Hydrophobicity Value | 0.316 |
Molecular Weight (kDa) | 115.0 |
Isoelectric Point (pI) | 5.65 |
Individual Mappings | |
Additional evidence for subcellular localization |
Identified using the Resistance Gene Identifier (RGI)
Model Name | Definition | Accession | Model Type (?) | SNP | Cutoff | Bit Score | Percent Identity | CARD Version |
adeF | AdeF is the membrane fusion protein of the multidrug efflux complex AdeFGH. [PMID:20696879] | ARO:3000777 | protein homolog model | Strict | 1347.8 | 67.27 | 3.2.5 |
Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 489 genera
|
Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
Pseudomonas Ortholog Group |
POG000417 (2093 members) |
Putative Inparalogs | None Found |
STRING database | Search for predicted protein-protein interactions using:
Search term: PFL_3241
Search term: mexF
Search term: multidrug efflux RND transporter permease MexF
|